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https://github.com/huggingface/lerobot.git
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refactor(datasets): module cleanup (#3169)
This commit is contained in:
@@ -20,7 +20,7 @@ The dataset you requested ({repo_id}) is in {version} format.
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We introduced a new format since v3.0 which is not backward compatible with v2.1.
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Please, update your dataset to the new format using this command:
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```
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python -m lerobot.datasets.v30.convert_dataset_v21_to_v30 --repo-id={repo_id}
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python -m lerobot.scripts.convert_dataset_v21_to_v30 --repo-id={repo_id}
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```
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If you already have a converted version uploaded to the hub, then this error might be because of
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@@ -596,7 +596,7 @@ class LeRobotDataset(torch.utils.data.Dataset):
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the dataset from that address and load it, pending your dataset is compliant with
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codebase_version v3.0. If your dataset has been created before this new format, you will be
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prompted to convert it using our conversion script from v2.1 to v3.0, which you can find at
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lerobot/datasets/v30/convert_dataset_v21_to_v30.py.
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lerobot/scripts/convert_dataset_v21_to_v30.py.
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2. Your dataset doesn't already exists (either on local disk or on the Hub): you can create an empty
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@@ -1683,7 +1683,6 @@ class LeRobotDataset(torch.utils.data.Dataset):
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if image_writer_processes or image_writer_threads:
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obj.start_image_writer(image_writer_processes, image_writer_threads)
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# TODO(aliberts, rcadene, alexander-soare): Merge this with OnlineBuffer/DataBuffer
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obj.episode_buffer = obj.create_episode_buffer()
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obj.episodes = None
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@@ -1,382 +0,0 @@
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#!/usr/bin/env python
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# Copyright 2024 The HuggingFace Inc. team. All rights reserved.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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"""An online buffer for the online training loop in train.py
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Note to maintainers: This duplicates some logic from LeRobotDataset and EpisodeAwareSampler. We should
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consider converging to one approach. Here we have opted to use numpy.memmap to back the data buffer. It's much
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faster than using HuggingFace Datasets as there's no conversion to an intermediate non-python object. Also it
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supports in-place slicing and mutation which is very handy for a dynamic buffer.
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"""
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import os
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from pathlib import Path
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from typing import Any
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import numpy as np
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import torch
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from lerobot.datasets.lerobot_dataset import LeRobotDataset
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def _make_memmap_safe(**kwargs) -> np.memmap:
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"""Make a numpy memmap with checks on available disk space first.
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Expected kwargs are: "filename", "dtype" (must by np.dtype), "mode" and "shape"
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For information on dtypes:
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https://numpy.org/doc/stable/reference/arrays.dtypes.html#arrays-dtypes-constructing
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"""
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if kwargs["mode"].startswith("w"):
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required_space = kwargs["dtype"].itemsize * np.prod(kwargs["shape"]) # bytes
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stats = os.statvfs(Path(kwargs["filename"]).parent)
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available_space = stats.f_bavail * stats.f_frsize # bytes
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if required_space >= available_space * 0.8:
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raise RuntimeError(
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f"You're about to take up {required_space} of {available_space} bytes available."
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)
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return np.memmap(**kwargs)
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class OnlineBuffer(torch.utils.data.Dataset):
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"""FIFO data buffer for the online training loop in train.py.
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Follows the protocol of LeRobotDataset as much as is required to have it be used by the online training
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loop in the same way that a LeRobotDataset would be used.
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The underlying data structure will have data inserted in a circular fashion. Always insert after the
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last index, and when you reach the end, wrap around to the start.
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The data is stored in a numpy memmap.
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"""
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NEXT_INDEX_KEY = "_next_index"
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OCCUPANCY_MASK_KEY = "_occupancy_mask"
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INDEX_KEY = "index"
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FRAME_INDEX_KEY = "frame_index"
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EPISODE_INDEX_KEY = "episode_index"
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TIMESTAMP_KEY = "timestamp"
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IS_PAD_POSTFIX = "_is_pad"
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def __init__(
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self,
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write_dir: str | Path,
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data_spec: dict[str, Any] | None,
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buffer_capacity: int | None,
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fps: float | None = None,
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delta_timestamps: dict[str, list[float]] | dict[str, np.ndarray] | None = None,
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):
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"""
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The online buffer can be provided from scratch or you can load an existing online buffer by passing
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a `write_dir` associated with an existing buffer.
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Args:
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write_dir: Where to keep the numpy memmap files. One memmap file will be stored for each data key.
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Note that if the files already exist, they are opened in read-write mode (used for training
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resumption.)
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data_spec: A mapping from data key to data specification, like {data_key: {"shape": tuple[int],
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"dtype": np.dtype}}. This should include all the data that you wish to record into the buffer,
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but note that "index", "frame_index" and "episode_index" are already accounted for by this
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class, so you don't need to include them.
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buffer_capacity: How many frames should be stored in the buffer as a maximum. Be aware of your
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system's available disk space when choosing this.
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fps: Same as the fps concept in LeRobot dataset. Here it needs to be provided for the
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delta_timestamps logic. You can pass None if you are not using delta_timestamps.
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delta_timestamps: Same as the delta_timestamps concept in LeRobotDataset. This is internally
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converted to dict[str, np.ndarray] for optimization purposes.
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"""
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self.set_delta_timestamps(delta_timestamps)
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self._fps = fps
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# Tolerance in seconds used to discard loaded frames when their timestamps are not close enough from
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# the requested frames. It is only used when `delta_timestamps` is provided.
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# minus 1e-4 to account for possible numerical error
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self.tolerance_s = 1 / self.fps - 1e-4 if fps is not None else None
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self._buffer_capacity = buffer_capacity
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data_spec = self._make_data_spec(data_spec, buffer_capacity)
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Path(write_dir).mkdir(parents=True, exist_ok=True)
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self._data = {}
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for k, v in data_spec.items():
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self._data[k] = _make_memmap_safe(
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filename=Path(write_dir) / k,
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dtype=v["dtype"] if v is not None else None,
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mode="r+" if (Path(write_dir) / k).exists() else "w+",
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shape=tuple(v["shape"]) if v is not None else None,
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)
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@property
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def delta_timestamps(self) -> dict[str, np.ndarray] | None:
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return self._delta_timestamps
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def set_delta_timestamps(self, value: dict[str, list[float]] | None):
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"""Set delta_timestamps converting the values to numpy arrays.
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The conversion is for an optimization in the __getitem__. The loop is much slower if the arrays
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need to be converted into numpy arrays.
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"""
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if value is not None:
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self._delta_timestamps = {k: np.array(v) for k, v in value.items()}
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else:
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self._delta_timestamps = None
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def _make_data_spec(self, data_spec: dict[str, Any], buffer_capacity: int) -> dict[str, dict[str, Any]]:
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"""Makes the data spec for np.memmap."""
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if any(k.startswith("_") for k in data_spec):
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raise ValueError(
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"data_spec keys should not start with '_'. This prefix is reserved for internal logic."
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)
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preset_keys = {
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OnlineBuffer.INDEX_KEY,
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OnlineBuffer.FRAME_INDEX_KEY,
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OnlineBuffer.EPISODE_INDEX_KEY,
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OnlineBuffer.TIMESTAMP_KEY,
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}
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if len(intersection := set(data_spec).intersection(preset_keys)) > 0:
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raise ValueError(
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f"data_spec should not contain any of {preset_keys} as these are handled internally. "
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f"The provided data_spec has {intersection}."
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)
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complete_data_spec = {
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# _next_index will be a pointer to the next index that we should start filling from when we add
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# more data.
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OnlineBuffer.NEXT_INDEX_KEY: {"dtype": np.dtype("int64"), "shape": ()},
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# Since the memmap is initialized with all-zeros, this keeps track of which indices are occupied
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# with real data rather than the dummy initialization.
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OnlineBuffer.OCCUPANCY_MASK_KEY: {"dtype": np.dtype("?"), "shape": (buffer_capacity,)},
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OnlineBuffer.INDEX_KEY: {"dtype": np.dtype("int64"), "shape": (buffer_capacity,)},
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OnlineBuffer.FRAME_INDEX_KEY: {"dtype": np.dtype("int64"), "shape": (buffer_capacity,)},
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OnlineBuffer.EPISODE_INDEX_KEY: {"dtype": np.dtype("int64"), "shape": (buffer_capacity,)},
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OnlineBuffer.TIMESTAMP_KEY: {"dtype": np.dtype("float64"), "shape": (buffer_capacity,)},
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}
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for k, v in data_spec.items():
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complete_data_spec[k] = {"dtype": v["dtype"], "shape": (buffer_capacity, *v["shape"])}
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return complete_data_spec
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def add_data(self, data: dict[str, np.ndarray]):
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"""Add new data to the buffer, which could potentially mean shifting old data out.
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The new data should contain all the frames (in order) of any number of episodes. The indices should
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start from 0 (note to the developer: this can easily be generalized). See the `rollout` and
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`eval_policy` functions in `eval.py` for more information on how the data is constructed.
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Shift the incoming data index and episode_index to continue on from the last frame. Note that this
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will be done in place!
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"""
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if len(missing_keys := (set(self.data_keys).difference(set(data)))) > 0:
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raise ValueError(f"Missing data keys: {missing_keys}")
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new_data_length = len(data[self.data_keys[0]])
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if not all(len(data[k]) == new_data_length for k in self.data_keys):
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raise ValueError("All data items should have the same length")
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next_index = self._data[OnlineBuffer.NEXT_INDEX_KEY]
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# Sanity check to make sure that the new data indices start from 0.
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assert data[OnlineBuffer.EPISODE_INDEX_KEY][0].item() == 0
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assert data[OnlineBuffer.INDEX_KEY][0].item() == 0
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# Shift the incoming indices if necessary.
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if self.num_frames > 0:
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last_episode_index = self._data[OnlineBuffer.EPISODE_INDEX_KEY][next_index - 1]
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last_data_index = self._data[OnlineBuffer.INDEX_KEY][next_index - 1]
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data[OnlineBuffer.EPISODE_INDEX_KEY] += last_episode_index + 1
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data[OnlineBuffer.INDEX_KEY] += last_data_index + 1
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# Insert the new data starting from next_index. It may be necessary to wrap around to the start.
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n_surplus = max(0, new_data_length - (self._buffer_capacity - next_index))
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for k in self.data_keys:
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if n_surplus == 0:
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slc = slice(next_index, next_index + new_data_length)
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self._data[k][slc] = data[k]
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self._data[OnlineBuffer.OCCUPANCY_MASK_KEY][slc] = True
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else:
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self._data[k][next_index:] = data[k][:-n_surplus]
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self._data[OnlineBuffer.OCCUPANCY_MASK_KEY][next_index:] = True
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self._data[k][:n_surplus] = data[k][-n_surplus:]
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if n_surplus == 0:
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self._data[OnlineBuffer.NEXT_INDEX_KEY] = next_index + new_data_length
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else:
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self._data[OnlineBuffer.NEXT_INDEX_KEY] = n_surplus
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@property
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def data_keys(self) -> list[str]:
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keys = set(self._data)
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keys.remove(OnlineBuffer.OCCUPANCY_MASK_KEY)
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keys.remove(OnlineBuffer.NEXT_INDEX_KEY)
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return sorted(keys)
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@property
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def fps(self) -> float | None:
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return self._fps
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@property
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def num_episodes(self) -> int:
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return len(
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np.unique(self._data[OnlineBuffer.EPISODE_INDEX_KEY][self._data[OnlineBuffer.OCCUPANCY_MASK_KEY]])
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)
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@property
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def num_frames(self) -> int:
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return np.count_nonzero(self._data[OnlineBuffer.OCCUPANCY_MASK_KEY])
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def __len__(self):
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return self.num_frames
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def _item_to_tensors(self, item: dict) -> dict:
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item_ = {}
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for k, v in item.items():
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if isinstance(v, torch.Tensor):
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item_[k] = v
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elif isinstance(v, np.ndarray):
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item_[k] = torch.from_numpy(v)
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else:
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item_[k] = torch.tensor(v)
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return item_
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def __getitem__(self, idx: int) -> dict[str, torch.Tensor]:
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if idx >= len(self) or idx < -len(self):
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raise IndexError
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item = {k: v[idx] for k, v in self._data.items() if not k.startswith("_")}
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if self.delta_timestamps is None:
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return self._item_to_tensors(item)
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episode_index = item[OnlineBuffer.EPISODE_INDEX_KEY]
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current_ts = item[OnlineBuffer.TIMESTAMP_KEY]
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episode_data_indices = np.where(
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np.bitwise_and(
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self._data[OnlineBuffer.EPISODE_INDEX_KEY] == episode_index,
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self._data[OnlineBuffer.OCCUPANCY_MASK_KEY],
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)
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)[0]
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episode_timestamps = self._data[OnlineBuffer.TIMESTAMP_KEY][episode_data_indices]
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for data_key in self.delta_timestamps:
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# Note: The logic in this loop is copied from `load_previous_and_future_frames`.
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# Get timestamps used as query to retrieve data of previous/future frames.
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query_ts = current_ts + self.delta_timestamps[data_key]
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# Compute distances between each query timestamp and all timestamps of all the frames belonging to
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# the episode.
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dist = np.abs(query_ts[:, None] - episode_timestamps[None, :])
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argmin_ = np.argmin(dist, axis=1)
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min_ = dist[np.arange(dist.shape[0]), argmin_]
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is_pad = min_ > self.tolerance_s
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# Check violated query timestamps are all outside the episode range.
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assert (
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(query_ts[is_pad] < episode_timestamps[0]) | (episode_timestamps[-1] < query_ts[is_pad])
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).all(), (
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f"One or several timestamps unexpectedly violate the tolerance ({min_} > {self.tolerance_s=}"
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") inside the episode range."
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)
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# Load frames for this data key.
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item[data_key] = self._data[data_key][episode_data_indices[argmin_]]
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item[f"{data_key}{OnlineBuffer.IS_PAD_POSTFIX}"] = is_pad
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return self._item_to_tensors(item)
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def get_data_by_key(self, key: str) -> torch.Tensor:
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"""Returns all data for a given data key as a Tensor."""
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return torch.from_numpy(self._data[key][self._data[OnlineBuffer.OCCUPANCY_MASK_KEY]])
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def compute_sampler_weights(
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offline_dataset: LeRobotDataset,
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offline_drop_n_last_frames: int = 0,
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online_dataset: OnlineBuffer | None = None,
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online_sampling_ratio: float | None = None,
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online_drop_n_last_frames: int = 0,
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) -> torch.Tensor:
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"""Compute the sampling weights for the online training dataloader in train.py.
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Args:
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offline_dataset: The LeRobotDataset used for offline pre-training.
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online_drop_n_last_frames: Number of frames to drop from the end of each offline dataset episode.
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online_dataset: The OnlineBuffer used in online training.
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online_sampling_ratio: The proportion of data that should be sampled from the online dataset. If an
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online dataset is provided, this value must also be provided.
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online_drop_n_first_frames: See `offline_drop_n_last_frames`. This is the same, but for the online
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dataset.
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Returns:
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||||
Tensor of weights for [offline_dataset; online_dataset], normalized to 1.
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||||
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||||
Notes to maintainers:
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||||
- This duplicates some logic from EpisodeAwareSampler. We should consider converging to one approach.
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||||
- When used with `torch.utils.data.WeightedRandomSampler`, it could completely replace
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||||
`EpisodeAwareSampler` as the online dataset related arguments are optional. The only missing feature
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||||
is the ability to turn shuffling off.
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- Options `drop_first_n_frames` and `episode_indices_to_use` can be added easily. They were not
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included here to avoid adding complexity.
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"""
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if len(offline_dataset) == 0 and (online_dataset is None or len(online_dataset) == 0):
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raise ValueError("At least one of `offline_dataset` or `online_dataset` should be contain data.")
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if (online_dataset is None) ^ (online_sampling_ratio is None):
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raise ValueError(
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"`online_dataset` and `online_sampling_ratio` must be provided together or not at all."
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)
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offline_sampling_ratio = 0 if online_sampling_ratio is None else 1 - online_sampling_ratio
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weights = []
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||||
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||||
if len(offline_dataset) > 0:
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offline_data_mask_indices = []
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for start_index, end_index in zip(
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||||
offline_dataset.meta.episodes["dataset_from_index"],
|
||||
offline_dataset.meta.episodes["dataset_to_index"],
|
||||
strict=True,
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):
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offline_data_mask_indices.extend(range(start_index, end_index - offline_drop_n_last_frames))
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offline_data_mask = torch.zeros(len(offline_dataset), dtype=torch.bool)
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offline_data_mask[torch.tensor(offline_data_mask_indices)] = True
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weights.append(
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||||
torch.full(
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size=(len(offline_dataset),),
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||||
fill_value=offline_sampling_ratio / offline_data_mask.sum(),
|
||||
)
|
||||
* offline_data_mask
|
||||
)
|
||||
|
||||
if online_dataset is not None and len(online_dataset) > 0:
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online_data_mask_indices = []
|
||||
episode_indices = online_dataset.get_data_by_key("episode_index")
|
||||
for episode_idx in torch.unique(episode_indices):
|
||||
where_episode = torch.where(episode_indices == episode_idx)
|
||||
start_index = where_episode[0][0]
|
||||
end_index = where_episode[0][-1] + 1
|
||||
online_data_mask_indices.extend(
|
||||
range(start_index.item(), end_index.item() - online_drop_n_last_frames)
|
||||
)
|
||||
online_data_mask = torch.zeros(len(online_dataset), dtype=torch.bool)
|
||||
online_data_mask[torch.tensor(online_data_mask_indices)] = True
|
||||
weights.append(
|
||||
torch.full(
|
||||
size=(len(online_dataset),),
|
||||
fill_value=online_sampling_ratio / online_data_mask.sum(),
|
||||
)
|
||||
* online_data_mask
|
||||
)
|
||||
|
||||
weights = torch.cat(weights)
|
||||
|
||||
if weights.sum() == 0:
|
||||
weights += 1 / len(weights)
|
||||
else:
|
||||
weights /= weights.sum()
|
||||
|
||||
return weights
|
||||
@@ -1,73 +0,0 @@
|
||||
#!/usr/bin/env python
|
||||
|
||||
# Copyright 2024 The HuggingFace Inc. team. All rights reserved.
|
||||
#
|
||||
# Licensed under the Apache License, Version 2.0 (the "License");
|
||||
# you may not use this file except in compliance with the License.
|
||||
# You may obtain a copy of the License at
|
||||
#
|
||||
# http://www.apache.org/licenses/LICENSE-2.0
|
||||
#
|
||||
# Unless required by applicable law or agreed to in writing, software
|
||||
# distributed under the License is distributed on an "AS IS" BASIS,
|
||||
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
# See the License for the specific language governing permissions and
|
||||
# limitations under the License.
|
||||
|
||||
import datasets
|
||||
import torch
|
||||
|
||||
|
||||
# TODO(aliberts): remove
|
||||
def calculate_episode_data_index(hf_dataset: datasets.Dataset) -> dict[str, torch.Tensor]:
|
||||
"""
|
||||
Calculate episode data index for the provided HuggingFace Dataset. Relies on episode_index column of hf_dataset.
|
||||
|
||||
Parameters:
|
||||
- hf_dataset (datasets.Dataset): A HuggingFace dataset containing the episode index.
|
||||
|
||||
Returns:
|
||||
- episode_data_index: A dictionary containing the data index for each episode. The dictionary has two keys:
|
||||
- "from": A tensor containing the starting index of each episode.
|
||||
- "to": A tensor containing the ending index of each episode.
|
||||
"""
|
||||
episode_data_index = {"from": [], "to": []}
|
||||
|
||||
current_episode = None
|
||||
"""
|
||||
The episode_index is a list of integers, each representing the episode index of the corresponding example.
|
||||
For instance, the following is a valid episode_index:
|
||||
[0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2]
|
||||
|
||||
Below, we iterate through the episode_index and populate the episode_data_index dictionary with the starting and
|
||||
ending index of each episode. For the episode_index above, the episode_data_index dictionary will look like this:
|
||||
{
|
||||
"from": [0, 3, 7],
|
||||
"to": [3, 7, 12]
|
||||
}
|
||||
"""
|
||||
if len(hf_dataset) == 0:
|
||||
episode_data_index = {
|
||||
"from": torch.tensor([]),
|
||||
"to": torch.tensor([]),
|
||||
}
|
||||
return episode_data_index
|
||||
for idx, episode_idx in enumerate(hf_dataset["episode_index"]):
|
||||
if episode_idx != current_episode:
|
||||
# We encountered a new episode, so we append its starting location to the "from" list
|
||||
episode_data_index["from"].append(idx)
|
||||
# If this is not the first episode, we append the ending location of the previous episode to the "to" list
|
||||
if current_episode is not None:
|
||||
episode_data_index["to"].append(idx)
|
||||
# Let's keep track of the current episode index
|
||||
current_episode = episode_idx
|
||||
else:
|
||||
# We are still in the same episode, so there is nothing for us to do here
|
||||
pass
|
||||
# We have reached the end of the dataset, so we append the ending location of the last episode to the "to" list
|
||||
episode_data_index["to"].append(idx + 1)
|
||||
|
||||
for k in ["from", "to"]:
|
||||
episode_data_index[k] = torch.tensor(episode_data_index[k])
|
||||
|
||||
return episode_data_index
|
||||
+1
-1
@@ -28,7 +28,7 @@ quantile statistics (q01, q10, q50, q90, q99) in their metadata. This script:
|
||||
Usage:
|
||||
|
||||
```bash
|
||||
python src/lerobot/datasets/v30/augment_dataset_quantile_stats.py \
|
||||
python src/lerobot/scripts/augment_dataset_quantile_stats.py \
|
||||
--repo-id=lerobot/pusht \
|
||||
```
|
||||
"""
|
||||
+2
-2
@@ -28,13 +28,13 @@ Usage:
|
||||
|
||||
Convert a dataset from the hub:
|
||||
```bash
|
||||
python src/lerobot/datasets/v30/convert_dataset_v21_to_v30.py \
|
||||
python src/lerobot/scripts/convert_dataset_v21_to_v30.py \
|
||||
--repo-id=lerobot/pusht
|
||||
```
|
||||
|
||||
Convert a local dataset (works in place):
|
||||
```bash
|
||||
python src/lerobot/datasets/v30/convert_dataset_v21_to_v30.py \
|
||||
python src/lerobot/scripts/convert_dataset_v21_to_v30.py \
|
||||
--repo-id=lerobot/pusht \
|
||||
--root=/path/to/local/dataset/directory \
|
||||
--push-to-hub=false
|
||||
Reference in New Issue
Block a user